PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947499.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 155aa MW: 17028.5 Da PI: 8.5137

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947499.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00061	35	57	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_022947499.1 35 FVCKTCNREFSSFQALGGHRASH 57 89**********99999998887 PP
2	zf-C2H2	12.2	0.00056	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F+ L H+r+H XP_022947499.1 77 HECSICGLEFPVGQALGGHMRRH 99 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MKRVRFESEI DSLLMADCLI SLSKSKTESF RRRVFVCKTC NREFSSFQAL GGHRASHRKP 60 KFPSDTSQNN AIKSKPHECS ICGLEFPVGQ ALGGHMRRHR NSSPVPVSLT PAQPVSDDSD 120 CDSGNGVVGM DLNLTPLEND LVRLQLMAPP VGCLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-38	C2H2 family protein