PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947599.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 322aa    MW: 36884.9 Da    PI: 4.846
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947599.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.25.1e-151663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++ Ed +l+  ++ +G ++W++ ++  g+ R++k+c++rw +yl
   XP_022947599.1 16 RGPWSPAEDFRLITFIQNHGHDNWRALPKQAGLLRCGKSCRLRWINYL 63
                     89******************************99************97 PP
2Myb_DNA-binding53.26.9e-1769114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+e +++++k +G++ W++Ia++++ gRt++++k+ w+++l
   XP_022947599.1  69 RGNFTQDEEETIIKLHKTWGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGKGRAPCCD KNEVKRGPWS PAEDFRLITF IQNHGHDNWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTQDEEETI IKLHKTWGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLLP  120
TSKVSDSSED EPKESRTTSS SSSSSVLFSN ENQNLETEPL NKSNPINDNL VCSKQQTTST  180
SISSNSISSS QVEGCWPQNR VDFGEEVKEK KENDDDEEMG SKSNNMGIKI PLESDIEFWD  240
MLDLDNIHLF ESDEVDQSFC EGSNFVVQKN QEFENAKWFK YLENELGLNR PPEADDITAT  300
ERFSVDVDPC MAYFAEGFTR QL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.13e-74MYB family protein