PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947637.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 402aa    MW: 45941.5 Da    PI: 4.9904
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947637.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.7e-19197247256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r r +lg+f+tae+Aa a+++ + kl+ge
  XP_022947637.1 197 LYRGVRQRH-WGKWVAEIRLPRN---RNRLWLGTFDTAEDAALAYDREAFKLRGE 247
                     59******9.**********965...48*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MSHFKSSDCS NFSLTQTEQH MDEDKQIDHN DLESSFRRRQ GKPVQDETSV SPRPFKKIRD  60
PENHDPIHPL DSTSQQSFPF LNPASSVSHA SPSSARALLP FALETPQFSH QFKTESVAPM  120
PHRPSLLPTH NQHQLAPPAS TQYGFGYPPY FMGEFASFQQ QQQQQHQQFL QYWNESLDSN  180
SKGGFRPQVR PLNTTKLYRG VRQRHWGKWV AEIRLPRNRN RLWLGTFDTA EDAALAYDRE  240
AFKLRGENAR LNFPELFLNK DKEEASQTSG GELPPQKELN NNNNLDNDFE LEPNNETVAE  300
DNIHEDEAED AGEGVSKSQE MVWREMAEAW LNVMPAGWGP GSPVWDDLDT TNNLLLQPHL  360
PFANPTHQES FTSDLQMQQF NLTATSPSSS CSMKPFFLKD ED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.11e-47ERF family protein