PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947734.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 209aa    MW: 24498.5 Da    PI: 9.604
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947734.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.16.4e-32132190159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver +edp++v++tYeg+H h+
  XP_022947734.1 132 LDDGYKWRKYGQKVVKNTHHPRSYYRCTQDDCRVKKRVERLDEDPRMVITTYEGRHIHS 190
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MGSKSQILLN PQALFEDEEH EQASTQHQME FFSFPSNFNV SHLPSIPQHQ TLSPSTPSLH  60
PNLSQTLNSS HFPTPHLLSL QTSTPNPWAF GKRNEYHLGL GVSTMKMKRM KGRRKVREPR  120
FSFKTMTDVD VLDDGYKWRK YGQKVVKNTH HPRSYYRCTQ DDCRVKKRVE RLDEDPRMVI  180
TTYEGRHIHS PSHDTQDSEP HTHLNNFFW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.14e-49WRKY family protein