PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947761.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 204aa    MW: 23460.1 Da    PI: 4.3296
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947761.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.41.6e-24121371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppG+rF Ptde+lv ++L +k++  +  ++ +++i++++++ ++Pw+++ ++ ++ +  yfFs+  +        ++at++gyWk    d+++l
  XP_022947761.1  12 LPPGLRFCPTDEDLVLHFLYHKASLASphHSSNSIIPQLQLHLYNPWQFHGRALSDGDIHYFFSTVGE--------SKATENGYWKDVLMDEPIL 98 
                     79********************8877754555567**************9666566666688888765........46799*************9 PP

             NAM  94 sk.kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                     ++ +g +vg+kk  +f+    g++p++ +t+Wvm+eyr+
  XP_022947761.1  99 CSaTGDEVGIKKYHIFFvgeGGDSPTPIQTTWVMQEYRI 137
                     9878889********997755799*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MEASSENRFN LLPPGLRFCP TDEDLVLHFL YHKASLASPH HSSNSIIPQL QLHLYNPWQF  60
HGRALSDGDI HYFFSTVGES KATENGYWKD VLMDEPILCS ATGDEVGIKK YHIFFVGEGG  120
DSPTPIQTTW VMQEYRIYSY LLDTHAHSPD TLPKQESEFG LWVMCRVFEA KDNSGRSIFS  180
YEDDEDNESE LSYLDEMYLT MDDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-43NAC family protein