PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947793.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 290aa    MW: 33313.3 Da    PI: 7.4952
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947793.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.98.4e-49231513128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     pGfrFhPtdeelv++yL++kv++k+++l e ik++diy+++Pw+Lp    +++ekewy F+kr +ky+++ r+nr+t +g+Wkatg dk+++s+ 
  XP_022947793.1  23 PGFRFHPTDEELVDYYLRRKVHNKSVTL-ELIKQIDIYRYNPWELPyIGGTSGEKEWYVFVKRGRKYKNSVRPNRVTGAGFWKATGIDKPIYSQg 116
                     9************************999.89***************545567899**************************************85 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++  +glkktLvfykg+a +g+kt+W+mhe+rl
  XP_022947793.1 117 eqGKGCIGLKKTLVFYKGSAGRGVKTEWMMHEFRL 151
                     444444***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MAAAAAATTT TDFDMDDYQF PLPGFRFHPT DEELVDYYLR RKVHNKSVTL ELIKQIDIYR  60
YNPWELPYIG GTSGEKEWYV FVKRGRKYKN SVRPNRVTGA GFWKATGIDK PIYSQGEQGK  120
GCIGLKKTLV FYKGSAGRGV KTEWMMHEFR LPPSNGSNSH NSHNSHNSHL PKTIINGDQE  180
AEIWTLCRIF KRSVTCRRYT PNWKEMMKTK RCSNSVGDEC YDEDGRETYI SFGCNSFNGF  240
EEKKATKEGA AEVVNQSPAS SEFSNFEEDW DELRSIVDFA FDPFFNNPSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.13e-77NAC family protein