PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947795.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 214aa MW: 24447.4 Da PI: 8.1918

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947795.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158	3.8e-49	23	151	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv++yL++kv++k+++l e ik++diy+++Pw+Lp +++ekewy F+kr +ky+++ r+nr+t +g+Wkatg dk+++s+ XP_022947795.1 23 PGFRFHPTDEELVDYYLRRKVHNKSVTL-ELIKQIDIYRYNPWELPyIGGTSGEKEWYVFVKRGRKYKNSVRPNRVTGAGFWKATGIDKPIYSQg 116 9**********************999.89***********545567899**********************************85 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfykg+a +g+kt+W+mhe+rl XP_022947795.1 117 eqGKGCIGLKKTLVFYKGSAGRGVKTEWMMHEFRL 151 444444*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MAAAAAATTT TDFDMDDYQF PLPGFRFHPT DEELVDYYLR RKVHNKSVTL ELIKQIDIYR 60 YNPWELPYIG GTSGEKEWYV FVKRGRKYKN SVRPNRVTGA GFWKATGIDK PIYSQGEQGK 120 GCIGLKKTLV FYKGSAGRGV KTEWMMHEFR LPPSNGSNSH NSHNSHNSHL PKTIINGDQE 180 AGTGDLDAMS YIQTECYVSK IYTELERNDE DQKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-69	NAC family protein