PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947817.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 253aa    MW: 28359.8 Da    PI: 6.9427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947817.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP269.27.5e-22103154156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     ++++GVr+++ +grW+AeIrdp+    r kr++lg+f taeeAa+ +++a++kl+g+
  XP_022947817.1 103 KKFRGVRQRP-WGRWAAEIRDPT----RrKRIWLGTFNTAEEAAAVYDRAALKLHGP 154
                     59********.**********84....34**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MSVGEMGFFP ERRINHRRKP PSSGDSLELQ QKLVRIIVTD ADATDSSSDD EMVSGSTKGI  60
RRQVREIPIG CYSVFYGSSE SPVPAISKKR STRSQSSKSF HRKKFRGVRQ RPWGRWAAEI  120
RDPTRRKRIW LGTFNTAEEA AAVYDRAALK LHGPNAETNF PDEGEVSTAA KGGNKQEDGL  180
KSPKTTAVWS PASVLHYDGA LPLIDEMFCR EIDEFEFNME AVARLPAARR QCGGEEDFGE  240
VELDLDYFLV DVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.12e-26ERF family protein