PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947832.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 279aa    MW: 31802.7 Da    PI: 5.1538
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947832.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.32e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lvd+++++G g+W++ ++  g++R++k+c++rw +yl
   XP_022947832.1 14 KGPWTPEEDQKLVDYIEKYGHGSWRSLPNLAGLNRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding506.7e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ +E++++++++  lG++ W+ Iar+++ gRt++++k++w++ 
   XP_022947832.1  67 RGNFSDQEEQIIINLHGALGNK-WSIIARHLP-GRTDNEIKNFWNTN 111
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MMSRSPMLEN GVKKGPWTPE EDQKLVDYIE KYGHGSWRSL PNLAGLNRCG KSCRLRWTNY  60
LRPDIIRGNF SDQEEQIIIN LHGALGNKWS IIARHLPGRT DNEIKNFWNT NLKKKLLQMG  120
IDPITHMPRN DPYLNNLSNL HHLLSFSTAP WDNPLGLHSQ ITQLARAQLL QNLWQLPSTS  180
SPSLYNSLFN AQQISYLQTS PISVEPSEKP LSCEDYDGAM DDTLGFRNDS NQSETPYDMS  240
QSSSSLPNLI PTSLECLKIP SVVEDKWEDL INDEESESY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.24e-76MYB family protein