PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947833.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 211aa    MW: 23160.3 Da    PI: 10.5585
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947833.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.6e-09118159854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r+RR+ri +++  L++l+P       +K++ a++L +Av+Y+k L
  XP_022947833.1 118 AARQRRERISQKIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 159
                     569******************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDDIDILKST LSPSNSIDMS STILLNNNNS SHYPPLPFFS DFSSPSFHTA QPVLPNQQNR  60
QKRGGGGGGG GGGGGGMAAM REMIFRIAAM QPIQIDPEEI KAPKRRNVRI SKDPQSVAAR  120
QRRERISQKI RILQRLVPGG TKMDTASMLD EAVHYVKFLK RQVQTLEQAG FHNANTTNNN  180
NNCPNLSYSS ALFKACQMPH APSMPGSLQM H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120125RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.13e-45bHLH family protein