PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947877.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 303aa    MW: 32837.3 Da    PI: 8.68
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947877.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP109.74.4e-3449136180
             TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....ssssasec....eaessss 80 
                     a+g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+ l  +    s ++++ +    e+++ss 
  XP_022947877.1  49 ATGRKDRHSKVFTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLppcpSEPDPNGTggvtEHSESSR 136
                     589**************************************************************76652222233333322222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MNSDGGGEEL NKTGLHQGRR RPRMGMQSIS GGEILQVPGG GCGGVIVRAT GRKDRHSKVF  60
TAKGLRDRRV RLSAHTAIQF YDVQDRLGYD RPSKAVDWLI KKAKSAIDNL SHLPPCPSEP  120
DPNGTGGVTE HSESSRYNDF LFQSQLGENL IPPPLDSAAG FQSYQNLGLS LQTQNSPHHD  180
QNQTGLYAAG SGNSDLGFED GFEKIVAWNS NVFGSHPSFS QSSAAFPLRG PLQSSLESPV  240
PHYAWNELAV EPTGKRHPIP IHDNSSPSSP RFISGGLPHL DVHGRFQSDG GKVPSHSSLY  300
SRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.23e-38TCP family protein