PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947878.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 320aa    MW: 36597 Da    PI: 7.6597
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947878.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.66e-50181443128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     pGfrFhPtdeelv++yL++kv++k+l++ e ik++diyk+ PwdLp ++ + +ekewyfF+kr +ky+++ r+nr+t+sg+Wkatg dk+++ + 
  XP_022947878.1  18 PGFRFHPTDEELVDFYLRRKVHNKPLSI-ELIKQIDIYKYSPWDLPhASNAVGEKEWYFFCKRGRKYKNSGRPNRVTESGFWKATGIDKPIYGHt 111
                     9***************************.89***************445555899*************************************975 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++  +glkktLv+y+g+a kg+kt+W+m+e+rl
  XP_022947878.1 112 HHGCIGLKKTLVYYRGSAGKGTKTEWMMNEFRL 144
                     6667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MATPSQFDMP DDDQLPLPGF RFHPTDEELV DFYLRRKVHN KPLSIELIKQ IDIYKYSPWD  60
LPHASNAVGE KEWYFFCKRG RKYKNSGRPN RVTESGFWKA TGIDKPIYGH THHGCIGLKK  120
TLVYYRGSAG KGTKTEWMMN EFRLPSASSS TSTSRHPFGT MIKNSLQEAE IWTLCRIFKR  180
NISTRKGIST PNWREIPAPK SQSMEVMNFR ATTNDINIDR CLSDNQESRY IGFASHNSFI  240
SFGHVKEVQN SPQIQMVHGG RFITHFCGPT DQPSSADHNS PTNVSPSSSS FSDFDEDATD  300
LFGYEKWEEL KSILESDLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-79NAC family protein