PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948053.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 213aa    MW: 24101.4 Da    PI: 7.5873
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948053.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.1e-112169554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     +  E++RR++++  +++L +llP++ + ++  l+  +  e+A++YI+sL
  XP_022948053.1 21 RKVLEKNRRNQMKLLYSKLNSLLPPN-QSTDSPLTVLDQIEEAIKYIQSL 69
                    6789*********************6.479999***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MERGREAAGN QQNGSTNKVE RKVLEKNRRN QMKLLYSKLN SLLPPNQSTD SPLTVLDQIE  60
EAIKYIQSLT VKLDKVKEKK KRILMSAPTR SPSSNLPELK IKEMGSAVEV VFMTELNDRF  120
LFYEIIRIFH EERAEIINAT YSVLDDTVLY SLHAEIEDVM YAFGATKLTE RLKRLAYEWK  180
SDAEQQAAGA SSSGYGGSHP SEDTPTARYG GCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-31bHLH family protein