PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948054.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 197aa    MW: 22374.4 Da    PI: 6.5216
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948054.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.47.9e-11147855
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +E++RR++++  +++L +llP++ + ++  l+ ++  e+A++YIksL+
  XP_022948054.1  1 MEKNRRNQMKLLYSNLNSLLPPN-QSTDSPLTVSDQIEEAIKYIKSLE 47
                    6*********************6.479999****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEKNRRNQMK LLYSNLNSLL PPNQSTDSPL TVSDQIEEAI KYIKSLEMKL QKCKEKKERI  60
LARLNMSSAL SDRASTNNNS PELRIKEMGS IVEVVFTRGF EDRSLFDELI GVFHEERAEI  120
INLNYSVHED MFLYSIHAQI EDVVYELGAK KLVERLNKLV YEWKSDAEML AGGASSSGHG  180
GTHPPANIPT MSSGRHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-20bHLH family protein