PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948120.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 453aa MW: 49891.1 Da PI: 8.5686

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948120.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.3e-32	173	230	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgse+prsYY+Ct+++Cpv+k+ve+s +++++ei+Y+++Hnh+k XP_022948120.1 173 DDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITEIVYKSKHNHPK 230 8**************************************.*************85 PP
2	WRKY	101.1	6.6e-32	330	388	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK+vkg+++prsYY+Ct+agC v+k++er+++d k+v++tYeg+Hnhe XP_022948120.1 330 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVITTYEGKHNHE 388 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MVMEFFFSSR VEEDPTDGRP RLPESTAPPI SSKFSSTPNP NPPLLSAMSQ PLFSPSSFFT 60 IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTSHHQKNM KQEQHNLAEF SFPRTNPTKS 120 SSSSSIMFQS SSMQQNQAWV SQAAFNFPPE TTVNGGSKSD QHPQSQPKNR ASDDGYNWRK 180 YGQKLVKGSE NPRSYYKCTH PTCPVRKQVE KSLNGQITEI VYKSKHNHPK PEFPRRLSSA 240 SSSSSSSSSS SWLSQALPQT MAVEPKHSMA SDSVPTPENS STMIGDDDSD ELDAKRWKSE 300 SENEIILVAG GKTVREQRVV VQTISRVDKL DDGYWWRKYG QKVVKGNPNP RSYYKCTYAG 360 CGVRKHIERA SHDLKAVITT YEGKHNHEIP AARGGGSRPV SNNHGNDNGH ASNGGSGDIW 420 PSSEVSGGDD GFSNMLWRTK EDAADEIFRS LLD

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MVMEFFFSSR VEEDPTDGRP RLPESTAPPI SSKFSSTPNP NPPLLSAMSQ PLFSPSSFFT  60
IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTSHHQKNM KQEQHNLAEF SFPRTNPTKS  120
SSSSSIMFQS SSMQQNQAWV SQAAFNFPPE TTVNGGSKSD QHPQSQPKNR ASDDGYNWRK  180
YGQKLVKGSE NPRSYYKCTH PTCPVRKQVE KSLNGQITEI VYKSKHNHPK PEFPRRLSSA  240
SSSSSSSSSS SWLSQALPQT MAVEPKHSMA SDSVPTPENS STMIGDDDSD ELDAKRWKSE  300
SENEIILVAG GKTVREQRVV VQTISRVDKL DDGYWWRKYG QKVVKGNPNP RSYYKCTYAG  360
CGVRKHIERA SHDLKAVITT YEGKHNHEIP AARGGGSRPV SNNHGNDNGH ASNGGSGDIW  420
PSSEVSGGDD GFSNMLWRTK EDAADEIFRS LLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	3e-87	WRKY family protein