PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948123.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 406aa MW: 44744.3 Da PI: 9.0107

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948123.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.5e-32	126	183	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgse+prsYY+Ct+++Cpv+k+ve+s +++++ei+Y+++Hnh+k XP_022948123.1 126 DDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITEIVYKSKHNHPK 183 8**************************************.*************85 PP
2	WRKY	101.3	5.6e-32	283	341	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK+vkg+++prsYY+Ct+agC v+k++er+++d k+v++tYeg+Hnhe XP_022948123.1 283 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVITTYEGKHNHE 341 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MSQPLFSPSS FFTIPPGISP TQLLDSPVLL TSSNFQASPT TGAISTSHHQ KNMKQEQHNL 60 AEFSFPRTNP TKSSSSSSIM FQSSSMQQNQ AWVSQAAFNF PPETTVNGGS KSDQHPQSQP 120 KNRASDDGYN WRKYGQKLVK GSENPRSYYK CTHPTCPVRK QVEKSLNGQI TEIVYKSKHN 180 HPKPEFPRRL SSASSSSSSS SSSSWLSQAL PQTMAVEPKH SMASDSVPTP ENSSTMIGDD 240 DSDELDAKRW KSESENEIIL VAGGKTVREQ RVVVQTISRV DKLDDGYWWR KYGQKVVKGN 300 PNPRSYYKCT YAGCGVRKHI ERASHDLKAV ITTYEGKHNH EIPAARGGGS RPVSNNHGND 360 NGHASNGGSG DIWPSSEVSG GDDGFSNMLW RTKEDAADEI FRSLLD

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MSQPLFSPSS FFTIPPGISP TQLLDSPVLL TSSNFQASPT TGAISTSHHQ KNMKQEQHNL  60
AEFSFPRTNP TKSSSSSSIM FQSSSMQQNQ AWVSQAAFNF PPETTVNGGS KSDQHPQSQP  120
KNRASDDGYN WRKYGQKLVK GSENPRSYYK CTHPTCPVRK QVEKSLNGQI TEIVYKSKHN  180
HPKPEFPRRL SSASSSSSSS SSSSWLSQAL PQTMAVEPKH SMASDSVPTP ENSSTMIGDD  240
DSDELDAKRW KSESENEIIL VAGGKTVREQ RVVVQTISRV DKLDDGYWWR KYGQKVVKGN  300
PNPRSYYKCT YAGCGVRKHI ERASHDLKAV ITTYEGKHNH EIPAARGGGS RPVSNNHGND  360
NGHASNGGSG DIWPSSEVSG GDDGFSNMLW RTKEDAADEI FRSLLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-87	WRKY family protein