PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948182.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 346aa MW: 37848.9 Da PI: 7.96

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948182.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.9e-25	98	142	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_022948182.1 98 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 142 79****************************************986 PP
2	QLQ	60.5	4.8e-21	36	72	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT Q+q+L++Q+l++Ky++a++PvPp+L+++iqk XP_022948182.1 36 SPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQK 72 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MNSSGCGGED GSRTVVVGGT AAAAAGSGMM GMNNRSPFTV LQWQELEHQA LIFKYMMAGL 60 PVPPDLVLPI QKSFESISHR FFHHPTMAYC SFYGKKVDPE PGRCRRTDGK KWRCSKDAYP 120 DSKYCERHMH RGRNRSRKPV ESQTMTQSSS TVTSHTAIGS SSSSSGAGSF HGLPLNALSN 180 SQGTPTGTSQ PHYPLDSIPY GIPSKDYRYI QGLRPEAGVH SFFSEASGSS RAVQMDAPMD 240 NNTWPMMPSR SLSFPASKST ENSIFQSGYP QHSFFGGEFA SGDTLKQEGQ SLQPFFDEWP 300 KTRESWTGLD DERSNQTSYS TTQLSISIPM ASSDLSTTSS KSPHDN

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MNSSGCGGED GSRTVVVGGT AAAAAGSGMM GMNNRSPFTV LQWQELEHQA LIFKYMMAGL  60
PVPPDLVLPI QKSFESISHR FFHHPTMAYC SFYGKKVDPE PGRCRRTDGK KWRCSKDAYP  120
DSKYCERHMH RGRNRSRKPV ESQTMTQSSS TVTSHTAIGS SSSSSGAGSF HGLPLNALSN  180
SQGTPTGTSQ PHYPLDSIPY GIPSKDYRYI QGLRPEAGVH SFFSEASGSS RAVQMDAPMD  240
NNTWPMMPSR SLSFPASKST ENSIFQSGYP QHSFFGGEFA SGDTLKQEGQ SLQPFFDEWP  300
KTRESWTGLD DERSNQTSYS TTQLSISIPM ASSDLSTTSS KSPHDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-44	GRF family protein