PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948192.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 332aa    MW: 36146.2 Da    PI: 5.6873
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948192.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.21.9e-17251284134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C + kTp+WR gp g ktLCnaCG++y++ +
  XP_022948192.1 251 CSHCLVQKTPQWRTGPHGAKTLCNACGVRYKSGR 284
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MECLEAKALK SSFHWELAME SAQQDALVEE IWCLNGANLV AGEEFEVDEF FNFSNGDFEH  60
GSALRVEEND DYREFEKDLV SVSSDSNQSG EIPAAGEEDS KSLLAVELAI PGDAMAELEW  120
VSHFVDDSQL GFSSAAVAFS RSEPEKNLAG GVISCLPTFI PVKPRTKRSR QSRQTKSTGS  180
SLNQSSSSSS SSTSSGVSSA SPWFIFSDAG ENVDSSNAAG EPPKKQRKKS ITSSPTALQS  240
GGLTGQIPRR CSHCLVQKTP QWRTGPHGAK TLCNACGVRY KSGRLFPEYR PALSPTFCSN  300
VHSNSHRKVL EMRKMKEVSQ PATELTPMVR SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.28e-53GATA family protein