PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948203.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 242aa    MW: 26702.5 Da    PI: 9.0478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948203.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.9e-1184132455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++  rE+ RRd++N++f eL  +l +    + +K +K++iL  A++ + +Lq
  XP_022948203.1  84 TKACREKLRRDKLNESFLELAAVLEPG---KPPKTDKVAILSDAIRMVTDLQ 132
                     6789**********************9...99***************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MDYSAGNWNW LFDYSTMDDL AVAAAAAGNF SPPQSVGFSW SNPSINFSSK DSLEVDCSYG  60
DLDGLQEVGR KRPKTETGAV ASSTKACREK LRRDKLNESF LELAAVLEPG KPPKTDKVAI  120
LSDAIRMVTD LQTATQKLKQ SKEDLKAKIK ELKVEKNELR DEKQRLRAEK EKLELQIKGV  180
NTRAADIHRR PPTLSPAFTA QGQAAGHKLM PLIGYPGIAM WQFLPPAAVD ISQDHVLRPP  240
VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-82bHLH family protein