PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948260.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 541aa    MW: 59072.8 Da    PI: 7.9639
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948260.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.71.1e-33205262260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers  d++++ei+Y+g+Hnh+k
  XP_022948260.1 205 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 262
                     8****************************************.***************85 PP
2WRKY106.11.9e-33373431159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnhe
  XP_022948260.1 373 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHE 431
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MASSSGSLDT SANSHPSFTF STHPFMTTSY SDLLAAGSND LPSSAAAHGA HRGSGTGVPK  60
FKSLPPPSLP LSPPTLFPSP LFSIPPGLSP TELLDSPVLL SASYVLPSPT TGSFPSQSLN  120
WKNNSGYNQQ SIKEENKFLS EFSFLNQSSQ PPPTSFQPAP TTEGKKQDGS MQSFSPEYGI  180
VQNQSRNNAG RDYPQQSQTV NRRSDDGYNW RKYGQKQVKG SENPRSYYKC TFPNCPTKKK  240
VERSLDGQIT EIVYKGSHNH PKPQSTRKSS LSSAVSASNP AASDMAEQSF TTQGSSQFDG  300
VATPENSLIS VGDDEFDRSS QRSKSAGDDN DEDEPEAKRR RDGDNSEGIS AAGNRTVREP  360
RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT NPGCPVRKHV ERASHDLRAV  420
ITTYEGKHNH EVPPARGSGS HSLSRPFPSN DPSATAIRPL AVTHQANNGA DNNNDNLLHG  480
LRQTPFTLEM VQNSNGFSFP EFGNSMGMGS YMNPTQSKDS LFVRAKEEPR DHDMFIQSLL  540
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-110WRKY family protein