PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948330.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 248aa    MW: 27988.8 Da    PI: 8.5023
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948330.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.6e-09162209455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L+ l+P +    +k +   ++L +++ Y++sLq
  XP_022948330.1 162 SHSLAERVRREKINNKLKCLQNLVPGC----HKTMGMTMVLDETITYVHSLQ 209
                     8*************************9....7779999************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MIEFRQDLHH FKSSKASEER GLNMEVINQF PNMTESMLED FNETDFSEEN FLGYHFQLPE  60
NTTRSSISDF PRVALFKCQN EFPVITRSSP LVDSSQETMN RKAKQVLVSF SGTPCSAFGN  120
NCSVARNLKN LGGRKRRKCE KEQEKPAEVV HIRAKRGEAT HSHSLAERVR REKINNKLKC  180
LQNLVPGCHK TMGMTMVLDE TITYVHSLQN QVEFLSMELA TACSTLGINS GMGATRKASH  240
NIAGDKIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.18e-38bHLH family protein