PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948442.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 470aa MW: 52376.1 Da PI: 6.9591

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948442.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.5	2.1e-33	18	108	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y+++++++++e++sw+++++sfvv+++ efa+ +Lp++Fkh+nf+SF+RQLn+YgFkk+++e+ weF+++ F k++k+ll++ XP_022948442.1 18 FLIKTYDMVDESATDEIVSWTSSKKSFVVWNPPEFARLLLPTFFKHNNFSSFIRQLNTYGFKKIDSER---------WEFANDDFIKDQKHLLKN 103 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_022948442.1 104 IHRRK 108 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MEAAAGGGGT GGAGPAPFLI KTYDMVDESA TDEIVSWTSS KKSFVVWNPP EFARLLLPTF 60 FKHNNFSSFI RQLNTYGFKK IDSERWEFAN DDFIKDQKHL LKNIHRRKPI HSHSTPPGSL 120 GDPERAAFED EIDRLSRKKT TLEADISRFK QQKSTAKIQL QDLTVKVESM EKRQKNLLAF 180 LEKAVQNPSF VEHLARRVES MDFTAFNKKR RLPSADHSQP VLENSFLDNH SSSRSGSGNI 240 FHQDFSHKTR LETSSVSDIN LLSCSTQSSN EGGGSSQRNM SKLDTRGVQE SHHFAAETLD 300 LSDTGTSFVL KRDSSLSGKS PNDESPCLHS LQPNVSSKED GESHISCHLN LTLASSSLRV 360 NDADCSVRMP QLSQNLRKSS GSKVNSNGKE SDMRLFTKNI NLDEGTTTLC LKETSSNNHG 420 PPANPVRVND VFWEQFLTER PGCPESEEAS SNYRENLYKE PDDGRSGLSL

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MEAAAGGGGT GGAGPAPFLI KTYDMVDESA TDEIVSWTSS KKSFVVWNPP EFARLLLPTF  60
FKHNNFSSFI RQLNTYGFKK IDSERWEFAN DDFIKDQKHL LKNIHRRKPI HSHSTPPGSL  120
GDPERAAFED EIDRLSRKKT TLEADISRFK QQKSTAKIQL QDLTVKVESM EKRQKNLLAF  180
LEKAVQNPSF VEHLARRVES MDFTAFNKKR RLPSADHSQP VLENSFLDNH SSSRSGSGNI  240
FHQDFSHKTR LETSSVSDIN LLSCSTQSSN EGGGSSQRNM SKLDTRGVQE SHHFAAETLD  300
LSDTGTSFVL KRDSSLSGKS PNDESPCLHS LQPNVSSKED GESHISCHLN LTLASSSLRV  360
NDADCSVRMP QLSQNLRKSS GSKVNSNGKE SDMRLFTKNI NLDEGTTTLC LKETSSNNHG  420
PPANPVRVND VFWEQFLTER PGCPESEEAS SNYRENLYKE PDDGRSGLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-142	HSF family protein