PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948780.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 763aa MW: 84563.2 Da PI: 7.4464

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948780.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.7e-19	233	332	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022948780.1 233 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGQ 325 99************************555556677***********99899999999.*******************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022948780.1 326 LVMGFRK 332 7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MNIRRDEISN GFDAVTVGNV GLLRPASVED RVVRNGIKEE KLLQLCNIME ANETDHFQQA 60 QRVDRSASPA QNKGENLRSP FGEVGTSFFN MTKLPVKCQP SVGSVAYSQL DTRLKDMQES 120 LSQPSLNITL GVPLGTPNFV VPLSGSAAEE DEKSILPFQQ GHRSRPIFPK PLKTGTTVNS 180 ETRKGMTPLV RIARPPAEGR GKNQLLPRYW PRITDQELEQ ISGDLNSTIV PLFEKVLSAS 240 DAGRIGRLVL PKACAEAYFP PISQSEGLPV RIQDVKGNEW TFQFRFWPNN NSRMYVLEGV 300 TPCIQSMQLQ AGDTVTFSRI DPGGQLVMGF RKATNSSDTQ DAKISTLPNG SHSGDASFSG 360 VFQNLPLRAG DISLHKIENF GGRMTSGQQP MSTMDKKGTR NIGSKNKRLL MHSEDALELR 420 LTWEEAQDLL RPPPSANPTI VTIDDHEFEE YDEPPVFGKR TIFTVRPTGE QKQWAQCDDC 480 SKWRKLPVDV LLPPKWTCSD NIWDLSRCTC SAPEEMNTKE QENLLRASKD FKKRKIMKSQ 540 KSAQELEPSG LDALASAAVL GDSMADLQES GTTTRHPRHR QGCTCIVCIQ PPSGKGKHKS 600 TCTCNVCLTV KRRFKTLMLR KKKRLSEREM ETSLKEGNSQ FDESGTSGTL RGTSLQTNHS 660 ENERSQIRVK DEEAANSSGQ IDLNCHPDRE DMQLEVAGLS MMSLVEAASQ PLDSYSKQIG 720 VSSVTSEQQS SQPSSAESER RLSEEGCHGS AHESTSDRCR GHH

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MNIRRDEISN GFDAVTVGNV GLLRPASVED RVVRNGIKEE KLLQLCNIME ANETDHFQQA  60
QRVDRSASPA QNKGENLRSP FGEVGTSFFN MTKLPVKCQP SVGSVAYSQL DTRLKDMQES  120
LSQPSLNITL GVPLGTPNFV VPLSGSAAEE DEKSILPFQQ GHRSRPIFPK PLKTGTTVNS  180
ETRKGMTPLV RIARPPAEGR GKNQLLPRYW PRITDQELEQ ISGDLNSTIV PLFEKVLSAS  240
DAGRIGRLVL PKACAEAYFP PISQSEGLPV RIQDVKGNEW TFQFRFWPNN NSRMYVLEGV  300
TPCIQSMQLQ AGDTVTFSRI DPGGQLVMGF RKATNSSDTQ DAKISTLPNG SHSGDASFSG  360
VFQNLPLRAG DISLHKIENF GGRMTSGQQP MSTMDKKGTR NIGSKNKRLL MHSEDALELR  420
LTWEEAQDLL RPPPSANPTI VTIDDHEFEE YDEPPVFGKR TIFTVRPTGE QKQWAQCDDC  480
SKWRKLPVDV LLPPKWTCSD NIWDLSRCTC SAPEEMNTKE QENLLRASKD FKKRKIMKSQ  540
KSAQELEPSG LDALASAAVL GDSMADLQES GTTTRHPRHR QGCTCIVCIQ PPSGKGKHKS  600
TCTCNVCLTV KRRFKTLMLR KKKRLSEREM ETSLKEGNSQ FDESGTSGTL RGTSLQTNHS  660
ENERSQIRVK DEEAANSSGQ IDLNCHPDRE DMQLEVAGLS MMSLVEAASQ PLDSYSKQIG  720
VSSVTSEQQS SQPSSAESER RLSEEGCHGS AHESTSDRCR GHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	611	622	KRRFKTLMLRKK
2	611	624	KRRFKTLMLRKKKR
3	619	625	LRKKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein