PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948843.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 271aa    MW: 30665.3 Da    PI: 7.5619
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948843.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding521.6e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+ +++ +G+g +W + +++ g++R++k+c++rw++yl
   XP_022948843.1 14 KGPWSPEEDAKLKAYIHNHGTGgNWISLPQKAGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding41.23.7e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd ++  ++   G++ W+ Ia  ++ gRt++++k++w++
   XP_022948843.1  69 GGFTEEEDRIICTLFSTIGSR-WSIIATQLP-GRTDNDIKNHWNS 111
                      569******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MGRSPCCDKA NVKKGPWSPE EDAKLKAYIH NHGTGGNWIS LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGG FTEEEDRIIC TLFSTIGSRW SIIATQLPGR TDNDIKNHWN SKLKKKLIGM  120
EKHPQIIPPT TMPYSSHHND HQVSSFPAQP LSSIPSNWSN NNDNDNDNID NISPCLVPTQ  180
ESNMNSLLSS LMFQHNQTLD GRSCTQINNT SRIMMMGFQN QTHNYNYYYD AMNDEEHNNI  240
CFNGGGGGGD DDHVHSTTSL FQCMEGNFMK F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.13e-76MYB family protein