PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948860.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 544aa MW: 60751.4 Da PI: 7.9948

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948860.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.4e-08	422	470	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt ++k++w+++l XP_022948860.1 422 SWTLSEVMKLVEGVSKYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 470 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL 60 DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVAC 120 SGINKLSGTV NRQTTDDIFN LAPGSCNASF LGNVDFGYPQ GFCSTDLGVD LSFAGGLGPK 180 PLCDWNSPFI RDIQLKNSLS VAGHNVGFDQ KDAKLMISSS TGSSGCSGSS TACLNDENMS 240 DDRPVKRKRL SSCDSSKINS EHIESKIVPF NEGNKVETLV TEKRLRKPPR RYSEESIEQK 300 SRSNFKKSAL KASKDKSLPS VCHRHQWQKK LKAAPIVPKD KSFNGGCIQV PFGLPIEEGH 360 STKKRICWEP EEIKDNRILC IKDKNDVESF SAESEDENTE DECVTKGNTT QKGNSRRKHH 420 ISWTLSEVMK LVEGVSKYGV GRWTEIKRLQ FSSSSHRTSV DLKDKWRNLL KASDTQLQNR 480 RKVVLGRKQA LQQVPESVLC RVRELAAIYP YPRENKSKET CSAPTTSSFK SSTSNMLVCL 540 PTVM

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL  60
DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVAC  120
SGINKLSGTV NRQTTDDIFN LAPGSCNASF LGNVDFGYPQ GFCSTDLGVD LSFAGGLGPK  180
PLCDWNSPFI RDIQLKNSLS VAGHNVGFDQ KDAKLMISSS TGSSGCSGSS TACLNDENMS  240
DDRPVKRKRL SSCDSSKINS EHIESKIVPF NEGNKVETLV TEKRLRKPPR RYSEESIEQK  300
SRSNFKKSAL KASKDKSLPS VCHRHQWQKK LKAAPIVPKD KSFNGGCIQV PFGLPIEEGH  360
STKKRICWEP EEIKDNRILC IKDKNDVESF SAESEDENTE DECVTKGNTT QKGNSRRKHH  420
ISWTLSEVMK LVEGVSKYGV GRWTEIKRLQ FSSSSHRTSV DLKDKWRNLL KASDTQLQNR  480
RKVVLGRKQA LQQVPESVLC RVRELAAIYP YPRENKSKET CSAPTTSSFK SSTSNMLVCL  540
PTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-29	MYB_related family protein