PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948861.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 519aa MW: 57970.2 Da PI: 7.898

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948861.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.1e-08	397	445	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt ++k++w+++l XP_022948861.1 397 SWTLSEVMKLVEGVSKYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 445 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL 60 DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVAC 120 SGINKLSGTV NRQTTDDIFN LAPGSCNASF LGNVDFGYPQ GFCSTDLGVD LSFAGVAGHN 180 VGFDQKDAKL MISSSTGSSG CSGSSTACLN DENMSDDRPV KRKRLSSCDS SKINSEHIES 240 KIVPFNEGNK VETLVTEKRL RKPPRRYSEE SIEQKSRSNF KKSALKASKD KSLPSVCHRH 300 QWQKKLKAAP IVPKDKSFNG GCIQVPFGLP IEEGHSTKKR ICWEPEEIKD NRILCIKDKN 360 DVESFSAESE DENTEDECVT KGNTTQKGNS RRKHHISWTL SEVMKLVEGV SKYGVGRWTE 420 IKRLQFSSSS HRTSVDLKDK WRNLLKASDT QLQNRRKVVL GRKQALQQVP ESVLCRVREL 480 AAIYPYPREN KSKETCSAPT TSSFKSSTSN MLVCLPTVM

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL  60
DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVAC  120
SGINKLSGTV NRQTTDDIFN LAPGSCNASF LGNVDFGYPQ GFCSTDLGVD LSFAGVAGHN  180
VGFDQKDAKL MISSSTGSSG CSGSSTACLN DENMSDDRPV KRKRLSSCDS SKINSEHIES  240
KIVPFNEGNK VETLVTEKRL RKPPRRYSEE SIEQKSRSNF KKSALKASKD KSLPSVCHRH  300
QWQKKLKAAP IVPKDKSFNG GCIQVPFGLP IEEGHSTKKR ICWEPEEIKD NRILCIKDKN  360
DVESFSAESE DENTEDECVT KGNTTQKGNS RRKHHISWTL SEVMKLVEGV SKYGVGRWTE  420
IKRLQFSSSS HRTSVDLKDK WRNLLKASDT QLQNRRKVVL GRKQALQQVP ESVLCRVREL  480
AAIYPYPREN KSKETCSAPT TSSFKSSTSN MLVCLPTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	7e-30	MYB_related family protein