PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948893.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 200aa    MW: 21880.5 Da    PI: 9.6306
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948893.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-192372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +gr++AeIrdp +   ++r++lg+f++ae+Aa+a+++a+  l+g
  XP_022948893.1 23 RYRGVRRRP-WGRFAAEIRDPLK---KTRVWLGTFDSAEDAARAYDNAAITLRG 72
                    7********.**********743...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MRRGRAAADT AVRVAPITGS ERRYRGVRRR PWGRFAAEIR DPLKKTRVWL GTFDSAEDAA  60
RAYDNAAITL RGPKAKTNFP LPTPTSFFDY PPPCPIPDLT NPHRPTSSTL SSTVESFSGP  120
RPPSAAAATS ASRRYPRTPP VVPEDCHSDC DSSSSVIDDG DIASSSMIRR KSPLPFDLNI  180
QPSDHLDFGG DDLRRTALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.14e-14ERF family protein