PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949001.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 148aa    MW: 16377.9 Da    PI: 8.8762
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949001.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.000944668123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ Fs+   L  H  +H
  XP_022949001.1 46 FVCKTCNREFSSFQALGGHRTSH 68
                    89**********99998888777 PP
2zf-C2H211.60.0008685107123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+Cg  F+    L  H+r+H
  XP_022949001.1  85 HECPICGLDFPIGQALGGHMRRH 107
                     79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MKREREGGEF EVLDMVDCLM LLSKMEEPRR KNGFAPTPAA DSDKIFVCKT CNREFSSFQA  60
LGGHRTSHTK PNFNANGPPT KSKAHECPIC GLDFPIGQAL GGHMRRHRNT AAAAVLKKSD  120
GCGKRVFELD LNLPPLENNL NLKLQLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.12e-32C2H2 family protein