PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022949048.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 272aa MW: 30378.1 Da PI: 8.6825

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022949048.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.3	3.3e-39	98	213	2	126
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssasn 84 +gkkdrhski+T++g+RdRRvRls+++a++fFdLqd+LG+dk+skt+eWL+ ++k+aikel +t s XP_022949048.1 98 TGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTkygnfevvggarR------------MSL--- 177 79**************************************************************4443333322221............111... PP TCP 85 sssgkaaksaakskksqksaasalnlakesrakarararert 126 a++ +++++ +++ + ++ lak+sraka++++r + XP_022949048.1 178 ------ASDVEEEEEMTNKVEVFNLLAKQSRAKAKEKKRVDD 213 ......112222233333333334555566666666655433 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MGSSSYNLNP FPYFPSSSTA SYNLPLSIPS LLNSEPSPTT FNFHQPHQDP VSFLAPYFPI 60 GHFSTSTTPE AVINFAVAGS NVQAFGNIPS APGARMGTGK KDRHSKIYTA QGLRDRRVRL 120 SIDIARKFFD LQDMLGYDKA SKTLEWLFSK SKKAIKELSR TKYGNFEVVG GARRMSLASD 180 VEEEEEMTNK VEVFNLLAKQ SRAKAKEKKR VDDENGDDDD DNDGKIDVHG GETSNLSMEE 240 SSFMNKRKLY AKKFIEDDEM KLPQKGISKN PP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-30	TCP family protein