PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949098.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 313aa    MW: 34226.7 Da    PI: 5.9949
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949098.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA542.3e-17209243135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022949098.1 209 CLHCAAEKTPQWRTGPTGPKTLCNACGVRYKSGRL 243
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEVPEYLLGG FYAAGASQFS PEKHHSTTDH FAVDEYLLDF SNDDVAMTSG FFDNVARNCS  60
DSSTVTAIES CNSSISSGDN QALGNFGSAS FGEAQFSTEL CIPRDDLAEL EWLSNFVEDS  120
FSTEEIEKDF PPIPFLTGTA AHPETPSSSG TTAFGYGSAK TTSFFEHEAL PGKARSKRSR  180
GSPCDWSTRL LQAGGPVKSE TTSPSGRKCL HCAAEKTPQW RTGPTGPKTL CNACGVRYKS  240
GRLVPEYRPA ASPTFVSTKH SNSHRKVMEL RRQKEVQQQE QFLSQGSIFG RSNGCDEYLI  300
HRPNGGDFRH MLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.18e-72GATA family protein