PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949201.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 195aa    MW: 21599.1 Da    PI: 4.417
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949201.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.3e-172674355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr ++ +g+Wv+eIr p++   + r++lg+f t+e+Aa+a++ a ++++g
  XP_022949201.1 26 YRGVRKRS-WGKWVSEIRQPRK---KSRIWLGTFTTPEMAARAHDVALLSIKG 74
                    9****888.**********843...6*********************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MAEPNNSNLE SESTEIKRGN RKHQIYRGVR KRSWGKWVSE IRQPRKKSRI WLGTFTTPEM  60
AARAHDVALL SIKGDSAKPI LNFPQLAGLL PRPVSLMPTD IQAAAAKAAA MVDFDSTVPT  120
TSSSNDEEGS DELGEIVELP NIEEEISAES LNKFELVDSV DWWGNPPYTA AETDFFAGFS  180
DQCTIPVIFD GGDWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.11e-46ERF family protein