PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949264.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 168aa    MW: 19321.9 Da    PI: 11.2496
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949264.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.3e-161863147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ed +l ++v+++G+ +W++Ia+++  gR++k+c++rw++ 
   XP_022949264.1 18 RGHWRPAEDAKLRELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 63
                     899*****************************.***********996 PP
2Myb_DNA-binding56.27.9e-1870113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
   XP_022949264.1  70 RRAFTQEEEERLMQAHRVHGNK-WAMIARLFP-GRTDNGVKNHWHV 113
                      678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MATKSDMNSG TNAKACARGH WRPAEDAKLR ELVALYGPQN WNLIAEKLDG RSGKSCRLRW  60
FNQLDPRINR RAFTQEEEER LMQAHRVHGN KWAMIARLFP GRTDNGVKNH WHVIMARKCR  120
HHFGAGRRRR RTTTSDEDSA TNQPPPFMDR RVEPALFFDF LGVGGGPT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117130RKCRHHFGAGRRRR
2127132RRRRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.15e-69MYB family protein