PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022949313.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 311aa MW: 34270.4 Da PI: 8.7526

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022949313.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.8	5.9e-30	167	226	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ XP_022949313.1 167 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHP 226 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MASSYSSWLD SVDTSLDLNL HPLRFSGEAP VTVSETASSS KERNYLDHEK VSVKEETGAL 60 MEELKRVSAE NKKLTEMLTV VCENYNTLRG HMVDQMNKNG EKEVFCSKKR KSESSNNNNM 120 VGINGNSESS STDEESYKKP KQETINKSSK TTRVQVKIGA SDSNLVVKDG YQWRKYGQKV 180 TRDNPCPRAY FKCSFAPSCP VKKKVQRSVE DQSILVATYE GEHNHPQSSP MEATSGTAAA 240 RCVGLTPAAP TSPLDSRKPK SPSETKATSS PRFHSPEMQQ FLVEQMASSL TKDPNFTAAL 300 AAAISGKIFP H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	141	KKRKSESSNNNNMVGINGNSESSSTDEESYKKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	6e-86	WRKY family protein