PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949509.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 268aa    MW: 30574.8 Da    PI: 6.7391
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949509.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.4e-182168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll+++++ +G g+W++ a+  g++Rt+k+c++rw++yl
   XP_022949509.1 21 RGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYL 68
                     89********************************************97 PP
2Myb_DNA-binding48.22.4e-1574117146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++
   XP_022949509.1  74 RGNLTLQEQLLILELHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 117
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAGVSSTAAH RPSEEESELR RGPWTVEEDT LLIHYIAAHG EGQWNLLAKQ AGLKRTGKSC  60
RLRWLNYLKP DIKRGNLTLQ EQLLILELHS KWGNRWSKIA QQLPGRTDNE IKNYWRTRVQ  120
KQLRQLKVQA HSRKLLDAIC HLSMLEAMDQ TSNYSINLPP SLHNMNLPNS SNNTVLLPAN  180
HCSGAPPPPP PPSSVQQWPE ISAWPPSPCG EFMEAWRFDM VEQKQLHEPV GALGDWEVGD  240
RDAQMIAPDW VLEDAMVENL WSLDHHLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.15e-61MYB family protein