PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022949547.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 230aa MW: 26345.5 Da PI: 6.5164

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022949547.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.1	4.9e-19	6	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll +v +G g+W+++ar g++Rt+k+c++rw++yl XP_022949547.1 6 KGPWTPEEDSLLFSYVSIHGEGHWNSVARSTGLKRTGKSCRLRWLNYL 53 79********************************************97 PP
2	Myb_DNA-binding	47.3	4.7e-15	59	102	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_022949547.1 59 RGNITLQEQLLILQLHSRWGNR-WSKIAQFLP-GRTDNEIKNYWRT 102 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MEDLKKGPWT PEEDSLLFSY VSIHGEGHWN SVARSTGLKR TGKSCRLRWL NYLRPNVRRG 60 NITLQEQLLI LQLHSRWGNR WSKIAQFLPG RTDNEIKNYW RTRVQKQAKQ LNCDVNSQRF 120 RDAMRHVWIP RMVERITATS SPLSSLPPPC IDISTSTSVV FETTWANPND NNFPANVSAS 180 SSDVSDLTAV DGSGWDEGFG SEWLEGDGVD SLESLWTEEN ICFLRQQLFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	1e-70	MYB family protein