PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022949587.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 463aa MW: 51620.9 Da PI: 7.8682

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022949587.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.3e-17	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ XP_022949587.1 59 REKWTEEEHQRFLEALKLYGRG-WRQIKEHVG-TKTAVQIRSHAQKF 103 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MAVQEKNDGT LSNSSIGANN CLSSDGTQLD PLMRVSSLCS YGNESSLKVR KPYTISKQRE 60 KWTEEEHQRF LEALKLYGRG WRQIKEHVGT KTAVQIRSHA QKFFSKVVRE PSGSNDSSIN 120 PIEIPPPRPK RKPLHPYPRK AVDSLKAISV AREPERSPSP NLSIAEKETQ SPTSVLTAFS 180 SDDQISTVSE QHNRCSSPIS QAVDIQSTRL PSVRKGEMLL LESSSERFPE DFLTLKSKPG 240 SASKKLDNKL HSPVKSIKLF GRTVMVDDDK KPSLHDFEVT KSLVLDGESK NDCGVYAEKP 300 VQMLPSKHMD VDLSLRIDNN GDWNMSPGGA PTNNTALNQE NSVLYVEAIA NAPQTCWSLY 360 QSVPYFYLAP PDQTNQVMEE RMQNDNSVES SCVDSCSGSS SKDKNENQSP EFECQDPCLV 420 GRGNRNESKK GFVPYKRCLA QREASSSFIV SEEREGRRVR VCL

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MAVQEKNDGT LSNSSIGANN CLSSDGTQLD PLMRVSSLCS YGNESSLKVR KPYTISKQRE  60
KWTEEEHQRF LEALKLYGRG WRQIKEHVGT KTAVQIRSHA QKFFSKVVRE PSGSNDSSIN  120
PIEIPPPRPK RKPLHPYPRK AVDSLKAISV AREPERSPSP NLSIAEKETQ SPTSVLTAFS  180
SDDQISTVSE QHNRCSSPIS QAVDIQSTRL PSVRKGEMLL LESSSERFPE DFLTLKSKPG  240
SASKKLDNKL HSPVKSIKLF GRTVMVDDDK KPSLHDFEVT KSLVLDGESK NDCGVYAEKP  300
VQMLPSKHMD VDLSLRIDNN GDWNMSPGGA PTNNTALNQE NSVLYVEAIA NAPQTCWSLY  360
QSVPYFYLAP PDQTNQVMEE RMQNDNSVES SCVDSCSGSS SKDKNENQSP EFECQDPCLV  420
GRGNRNESKK GFVPYKRCLA QREASSSFIV SEEREGRRVR VCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	2e-49	MYB_related family protein