PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949830.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 155aa    MW: 17398.1 Da    PI: 9.7829
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949830.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.54.8e-0584106123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ Cg+ Fs+   L  H+r+H
  XP_022949830.1  84 HECGLCGQEFSSGQALGGHMRRH 106
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MAAKRIRQEF EVSDMAKSPM FISYGIESSN PIIPFQNASV FDCKTCNRHF SSFQALGGHR  60
ASHKRPRTTA EDPKEPVDSK HKMHECGLCG QEFSSGQALG GHMRRHRVTA VPEKIPVLKR  120
SGSRRIMCLD LNLTPLENDL KMLFGKMTPT VDLVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-42C2H2 family protein