PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949895.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 323aa    MW: 34976.3 Da    PI: 6.858
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949895.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702232.95.3e-72982483154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaes 96 
                      g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerq++laa++++++ +   ++++kr+r+ + +++s+l++t +++++s
  XP_022949895.1  98 GGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLhGDNNPKRHRDYNPTSSSSLACTLIPNNTS 192
                     5789***************************************************99988777664788899*******************9986 PP

          DUF702  97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                        le+ ++P+e++s+avfrcvrvss d++++++aYqtav+igGhvfkGiLydqG+e+
  XP_022949895.1 193 G--LEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPET 248
                     5..88999************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MSGFFSLGGG GREEHQDHQD HQEHQQNNDT NPETLFWYKG NVELWQQQHH HHQHPQQEQP  60
LFQTQSRTPY SAALPVRTSD ESSSRSGNFM MIGSGSGGGG ISCQDCGNQA KKDCVHMRCR  120
TCCKSRGFHC ETHVKSTWVP AAKRRERQEK LAALQTQHQL HLHGDNNPKR HRDYNPTSSS  180
SLACTLIPNN TSGLEIGNFP AELNSPAVFR CVRVSSTDES DDQYAYQTAV NIGGHVFKGI  240
LYDQGPETNY IPPAETSSGG GGGGGGGSSS GVQPLNFITG ATDATTASGG SSAALPLLDP  300
SSLYSTPLNS FMAGTQFFLP PRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.12e-69SRS family protein