PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949899.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family DBB
Protein Properties Length: 169aa    MW: 18807.4 Da    PI: 6.9538
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949899.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.64.6e-07433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e   ++lfC  ++  lC  C  + H
  XP_022949899.1  4 LCDSCETAAATLFCAADEAALCTACDAKVH 33
                    6******99****************99988 PP
2zf-B_box26.31.5e-085192138
        zf-B_box  1 seerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                    s+ ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  XP_022949899.1 51 SQVPRCDICENAPAFFWCEIDGSSLCLQCDVIVHVGgkrmHK 92
                    5789***************************99966666776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MRILCDSCET AAATLFCAAD EAALCTACDA KVHMCNKLAS RHVRVGLANP SQVPRCDICE  60
NAPAFFWCEI DGSSLCLQCD VIVHVGGKRM HKRYLRLRQR VEFPGDTQND VKGPNAKPME  120
QVETVRGQNQ ERGEEIEKQE EDLRFSGVKG YSNGDGHSKR PNKVIDLNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.11e-64DBB family protein