PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949908.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Dof
Protein Properties Length: 250aa    MW: 27979.2 Da    PI: 9.9185
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949908.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.94e-3761119361
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                     e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg r+n+k+
  XP_022949908.1  61 ETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKR 119
                     6789************************************************9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MVFPSHPSNY LDPTTHQWQH QTPTHQSGTS FQLVSPPRAP PQVRPGSMVD RARMANLPVP  60
ETALKCPRCE STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRSVPVG GGYRRNNKRT  120
KSTSKSPVNS QCQPTTTTEI SGGETMRLNY IQNERGMDST HPPIGITSFL GFDQIQWRPQ  180
LQLHRTQPAR LLGNGGGGGG DDASSSYSIV GKMEATKMED DGDHHVNVGK PFWDRHYWNA  240
FNPSSSSSHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.14e-46Dof family protein