PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022949951.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 349aa MW: 39460.4 Da PI: 6.6957

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022949951.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.3e-09	275	309	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_022949951.1 275 KWPYPSESQKVALAESTGLDQKQINNWFINQRKRH 309 569*****************************885 PP
2	ELK	37.6	4.6e-13	229	250	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYs yLgsLkqEF+ XP_022949951.1 229 ELKGQLLRKYSRYLGSLKQEFM 250 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MDGPSGSSSG GGMMNFVDQN SHNGFGSMMM MMPLMSTSHQ QQHHQGDACS SFLPPPPPPP 60 PPNYTNNNTS NSISYFLDET NNNINEGSNG NSSCELKAKI MGHPHYHRLL VAYVNCRKVG 120 APPEVVARLE QACASAATMS GTSCIGQDPG LDQFMEAYCE MLTKYEQELS KPFRDAMLFL 180 QRIECQFKAL SISSSSDAGC GEAFDRNGSS EEEVDMNRQS IDPWAEDHEL KGQLLRKYSR 240 YLGSLKQEFM KKRKKGKLPK EARQQLLDWW SRHYKWPYPS ESQKVALAES TGLDQKQINN 300 WFINQRKRHW KPSEDMQFVV MDAAHHHPQY YMDSVLGNPF PFDISPTLL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MDGPSGSSSG GGMMNFVDQN SHNGFGSMMM MMPLMSTSHQ QQHHQGDACS SFLPPPPPPP  60
PPNYTNNNTS NSISYFLDET NNNINEGSNG NSSCELKAKI MGHPHYHRLL VAYVNCRKVG  120
APPEVVARLE QACASAATMS GTSCIGQDPG LDQFMEAYCE MLTKYEQELS KPFRDAMLFL  180
QRIECQFKAL SISSSSDAGC GEAFDRNGSS EEEVDMNRQS IDPWAEDHEL KGQLLRKYSR  240
YLGSLKQEFM KKRKKGKLPK EARQQLLDWW SRHYKWPYPS ESQKVALAES TGLDQKQINN  300
WFINQRKRHW KPSEDMQFVV MDAAHHHPQY YMDSVLGNPF PFDISPTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	254	LKQEFMKKRK
2	251	255	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-133	TALE family protein