PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950045.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 390aa    MW: 43124.4 Da    PI: 9.4252
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950045.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70224.29.2e-085387539
          DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39
                    + +C+ CGn a+  C +e C+ CC  +   C+ hv
  XP_022950045.1 53 KPKCRVCGNVARSRCPYESCKSCCARNQNPCHIHV 87
                    568*******************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MAAPSPSVSN NSSDTATTTT TTASAVTANV AVSSNHLANR TGTPPKTLRG LNKPKCRVCG  60
NVARSRCPYE SCKSCCARNQ NPCHIHVLKA NATFPDKTPS SSSPLFDKQS ADPSSGSSLR  120
VNSLRYLSSN FSQFSNVQIP LRSRKPLTRK DAAAINEWRF SKLREFREGH IEAENEAFDR  180
YMQNVNLLEE IFSMKSMIDE SAKDGPSINS ATESNPEEMI PGLMLKLGSN PVTSENSRKR  240
IRKIVEDGLR KLQKVEASDS INKVTDRAEP VKVADQTNAN DGCKTEKGWH AKKAQALGNL  300
IDKLNKARNE EDLKSCLAVK HQLFHKDVTS SQTESEEIGT SKEQVTKKDL DSRRELGYSL  360
PKLTNKTNID QETLNRIEAH FSSLKQIDNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.12e-90SRS family protein