PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950046.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 298aa    MW: 33388.4 Da    PI: 5.5323
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950046.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.66.5e-36101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw+++g +f+v+++ +fa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g+kell+k
  XP_022950046.1  10 FLTKTYQLVDDPATDDVVSWNQSGATFIVWKTADFARDLLPTYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANDNFRRGHKELLSK 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_022950046.1  96 IRRRKT 101
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAQRSLPAPF LTKTYQLVDD PATDDVVSWN QSGATFIVWK TADFARDLLP TYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANDNFRRGHK ELLSKIRRRK TVVMSQPLQT AHPGKFGGGG  120
NPSPSNSGED IGSTSTSSPD SKNPGSVEMG TMAQFADLTE ENEKLRKDNE MLNSELAQTK  180
KQCDELVVFL TDYLKVAPDQ INNIMRNRGS GADLKGKGKI DEEEEEDEEE EEEEEEGSVG  240
NGGETLKLFG VWLKGKEEKK KMKRVREEKI GCSNAPHAKA MKSVEMHAPL MTSSNLCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.12e-84HSF family protein