PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950075.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 611aa MW: 65795.7 Da PI: 6.7607

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950075.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	346	404	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_022950075.1 346 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 404 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MDKGWGLTMR DSDQSIGFLS HNPSPLTLNS FHTMFRATDF PVKLSRTDDN DAPPPPPDDN 60 RFVVNEVDFF SDNKRVVDYR EDQDAKPSAD ILATALVNKN DNVSTATGTA FVNTGLHLLT 120 ANTGSDQSST VDDGISSDGD DKRAKNELAQ LQMELQRMKA ENHKLRDMLS HVSNSYSTLQ 180 MHFFTLLQQN QASQPGHEAE IGEKKSRELK QEVGRAVVPR QFMDLGPSGN TAEMDELSNS 240 SSDERTRSGS PLNNNNNNNS ESASKKSSAR DHLEIAAPSD QGNSNFRDAK RSIPREESSE 300 SESHGWGPNK APRFNSSTKP LEQSTEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK 360 GNPCPRAYYR CTMAVGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM AMASTTTAAA 420 TMLLSGSMSS ADHNLMNPNL LARAILPCSS SMATISASAP FPTITLDLTQ TPNPLQFQRP 480 PAAPFHLPFP GGQPPLAAAQ VLGQPLYNQS KFSGLQLSHE MGANSPHLGH PQIAQPAPTT 540 QSGGASFADT LSAATAAITA DPNFTAALAA AISSIIGGAH SNNNSTTTTN TTTNNNNNGD 600 NNSKISSFPG N

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MDKGWGLTMR DSDQSIGFLS HNPSPLTLNS FHTMFRATDF PVKLSRTDDN DAPPPPPDDN  60
RFVVNEVDFF SDNKRVVDYR EDQDAKPSAD ILATALVNKN DNVSTATGTA FVNTGLHLLT  120
ANTGSDQSST VDDGISSDGD DKRAKNELAQ LQMELQRMKA ENHKLRDMLS HVSNSYSTLQ  180
MHFFTLLQQN QASQPGHEAE IGEKKSRELK QEVGRAVVPR QFMDLGPSGN TAEMDELSNS  240
SSDERTRSGS PLNNNNNNNS ESASKKSSAR DHLEIAAPSD QGNSNFRDAK RSIPREESSE  300
SESHGWGPNK APRFNSSTKP LEQSTEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK  360
GNPCPRAYYR CTMAVGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM AMASTTTAAA  420
TMLLSGSMSS ADHNLMNPNL LARAILPCSS SMATISASAP FPTITLDLTQ TPNPLQFQRP  480
PAAPFHLPFP GGQPPLAAAQ VLGQPLYNQS KFSGLQLSHE MGANSPHLGH PQIAQPAPTT  540
QSGGASFADT LSAATAAITA DPNFTAALAA AISSIIGGAH SNNNSTTTTN TTTNNNNNGD  600
NNSKISSFPG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-123	WRKY family protein