PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950274.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Nin-like
Protein Properties Length: 158aa    MW: 18418.1 Da    PI: 10.6933
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950274.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.64.4e-273685352
          RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                    + i l+dl+kyF+ pi++A+++L+v+lTvLKr+CR++GI+RWPhRkiks+
  XP_022950274.1 36 AGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSI 85
                    6799********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MTSSGFSTEF PNVADPMHDS YLSSKKKRRA TSEHIAGIAL SDLAKYFDVP ITEASRSLNV  60
GLTVLKRKCR EFGIHRWPHR KIKSIDGLIR DLQEEAKHRE EDQKALMAVT KRQMMLQNER  120
ESIERTPFRE LESETKRFRQ DVFKRRHKAR ALVSHSPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12529KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.13e-47Nin-like family protein