PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950370.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 296aa MW: 32967.9 Da PI: 6.5965

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950370.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.1	6.6e-32	129	185	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrC+ ++C++kk+vers edp++++itYeg H h XP_022950370.1 129 DDGYKWRKYGQKSIKNSPNPRSYYRCSNPRCSAKKQVERSIEDPDTFVITYEGLHLH 185 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MESLAAIPWS DIYNTVSDDH LLSLTDLLHH DDDNDNDTAA SPLFLVPQVA NSDPATMFPV 60 PGSTAYFGPT IGAVENALSI TPRSRNLQSS THIPRTTAGS SIRERVTVNN VEHKYSIRIK 120 SCDGNSLADD GYKWRKYGQK SIKNSPNPRS YYRCSNPRCS AKKQVERSIE DPDTFVITYE 180 GLHLHFAYPF FLMGQSPQDQ SPTKKPKMFG PDMEAHKMPT FITPGPLLPD NPKEATGPQG 240 LLEDVVPWMI RNPSTNHNTL SNSSFCSSYR SPPMSPPSPS TCPTFAPSYF SYFWEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	5e-45	WRKY family protein