PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950416.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 355aa    MW: 39150.8 Da    PI: 5.04
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950416.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19201251255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f ta eAa+a+++a+ kl+g
  XP_022950416.1 201 HYRGVRQRP-WGKFAAEIRDP---NrRGSRVWLGTFETAIEAARAYDRAAFKLRG 251
                     6********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
METVNLEQAA ALQNIKLHLL GELSPLPTNL AFDNVCVSSS DRSMSSGASS SSTSNCPLTI  60
SDYFNSDESF EFSSDFIRCE SSMSSNDDFF GFEMKPNVID LTTMNSAESI EFETKPFVFN  120
DSSSSSSSSS SSISLYSNSS FEVESKTNLM SQAANSNRKR ANLKISLPNK TTQWINFDTA  180
EKKNPVVVQR SKDLEAERKV HYRGVRQRPW GKFAAEIRDP NRRGSRVWLG TFETAIEAAR  240
AYDRAAFKLR GSKAILNFPL EATNSYSEPI AAGKRQREEE VGEVVEAVAL KKEKVEEVNP  300
ASVPAADVGY LKDMPLTPSI WSMVWDGETK GVFNIPPLSP LSPHPAFGFS QLVVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-45ERF family protein