PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950464.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 250aa    MW: 30459.9 Da    PI: 10.4944
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950464.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix73.53.7e-2334115286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W+  e+++L+++r+ +++r+++ k++  lW +v+ km+++gf+r+ +qCk+kw+nl +ryk +++++ k     ++++p++d+l+
  XP_022950464.1  34 WSVPETKELLAIREALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA---FKQQFPFYDDLH 115
                     ********************************************************************95...66789*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MENCDRRAFL HRRTNRIGVN AEAEAAAADR FPAWSVPETK ELLAIREALD RRFSEMKQNR  60
MLWISVAGKM KAKGFNRNDE QCKCKWKNLV TRYKGCETMD PKAFKQQFPF YDDLHAIFTA  120
RMQKNWWIEP ENRAKDSKRK ATIERLSSED PKRGKRRREE DERSNLKEIM KGFVEREKEM  180
ERQWREAFRV REEERRLKEK EWRMKMEGLE REKMMTWIMW REKDAERRER EEARALNTHA  240
FISALLRSFT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138158KRKATIERLSSEDPKRGKRRR
2151157PKRGKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.11e-42Trihelix family protein