PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950479.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 348aa MW: 40875.8 Da PI: 5.2172

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950479.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178	2.5e-55	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vik++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_022950479.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIKDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAV 103 69**************************.9***********953543344677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfy+grap+g+ktdW+mheyrle XP_022950479.1 104 YD-KNKLMGMRKTLVFYRGRAPNGQKTDWIMHEYRLE 139 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW 60 IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLM GMRKTLVFYR 120 GRAPNGQKTD WIMHEYRLES DENSPPQEEG WVVCRAFKKR TTGQSKTAVE QWDSSYFYDE 180 PIRVNSAIDP LEFISRQPLP QGLLEHNNIM CKQEMEAENV KLLQYNDPFV QLPQLESPSL 240 PLVKRSSSIS LLSDCYEEEH QPTKRRNNNN NTMSKVTDWR ALDKFVASQL SQDEAFEGER 300 DSRFEAQNNS HNHNSVDMAI LLMQNRVDDE ENLYKGFLSS NLESNMYY

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW  60
IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLM GMRKTLVFYR  120
GRAPNGQKTD WIMHEYRLES DENSPPQEEG WVVCRAFKKR TTGQSKTAVE QWDSSYFYDE  180
PIRVNSAIDP LEFISRQPLP QGLLEHNNIM CKQEMEAENV KLLQYNDPFV QLPQLESPSL  240
PLVKRSSSIS LLSDCYEEEH QPTKRRNNNN NTMSKVTDWR ALDKFVASQL SQDEAFEGER  300
DSRFEAQNNS HNHNSVDMAI LLMQNRVDDE ENLYKGFLSS NLESNMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-128	NAC family protein