PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950527.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 400aa    MW: 43890.1 Da    PI: 5.3911
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950527.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.63.5e-16180226455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L  A+eY+k+Lq
  XP_022950527.1 180 VHNMSEKRRRSRINEKMKALQNLVPNS-----NKTDKASMLDDAIEYLKQLQ 226
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MDHSISNNCD QNACSSSTWT LPATATAAVP SSSPPDEISL FLQQMLLRSS SAAPHSSLLF  60
SSPSPSIFSE FTCNIRAFTS PTHNISPPYG LPNAVPEEIS PVDASEQFAN FSSSGVVHDP  120
LRSCPTPAPP NASSIHVGAS DHYENDEFEC ESEGLEALVE DLPTKPNPRS SSKRSRAAEV  180
HNMSEKRRRS RINEKMKALQ NLVPNSNKTD KASMLDDAIE YLKQLQLQLQ MLSMRHGLSL  240
HPMNLPGSLQ YLQLSPMRMD FGEGSRSLSS DQERPNQIFL SLPDQKAASI HPFMSDIGRT  300
NPQTPFELAP PIQTHLVPFY LSGSPKSKIC REALRDHQVN AIGQSETTPF LSCPNNIPAP  360
PDLEELRNGV SLEPCIIEEN RSASTQAKQL KQLSCNDQDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.17e-32bHLH family protein